WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56H1.7.1 Sequence Name  F56H1.7.1
Length (nt)  688   Chromosome Location  I: 5760896-5762435
Chromosome . Primary Identifier  I Chromosome Location . Start  5760896
Chromosome Location . End  5762435 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56H1.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045483 oxy-5 F56H1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56H1.7 F56H1.7 489   I: 5761027-5761050

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56H1.7.1 5760896 5762435 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13935   155   I: 5760896-5761050 Caenorhabditis elegans
Exon13936   261   I: 5761544-5761804 Caenorhabditis elegans
Exon13937   172   I: 5761955-5762126 Caenorhabditis elegans
Exon13938   100   I: 5762336-5762435 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56H1.7.1 5760896 5762435 -1

1 Sequence

Length
688

1 Sequence Ontology Term

Identifier Name Description
transcript