WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0414.2.3 Sequence Name  B0414.2.3
Length (nt)  1493   Chromosome Location  I: 5776146-5788611
Chromosome . Primary Identifier  I Chromosome Location . Start  5776146
Chromosome Location . End  5788611 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0414.2.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004393 rnt-1 B0414.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0414.2 B0414.2 906   I: 5783841-5783909

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0414.2.3 5776146 5788611 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13964   95   I: 5776146-5776240 Caenorhabditis elegans
Exon13965   98   I: 5776283-5776380 Caenorhabditis elegans
Exon13968   142   I: 5776463-5776604 Caenorhabditis elegans
Exon13973   99   I: 5783811-5783909 Caenorhabditis elegans
Exon13978   118   I: 5784807-5784924 Caenorhabditis elegans
Exon13981   120   I: 5785181-5785300 Caenorhabditis elegans
Exon13984   74   I: 5786102-5786175 Caenorhabditis elegans
Exon13987   117   I: 5787152-5787268 Caenorhabditis elegans
Exon13990   59   I: 5787878-5787936 Caenorhabditis elegans
Exon13993   119   I: 5787989-5788107 Caenorhabditis elegans
Exon13996   452   I: 5788160-5788611 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0414.2.3 5776146 5788611 1

1 Sequence

Length
1493

1 Sequence Ontology Term

Identifier Name Description
transcript