WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0414.5.1 Sequence Name  B0414.5.1
Length (nt)  2803   Chromosome Location  I: 5788634-5791752
Chromosome . Primary Identifier  I Chromosome Location . Start  5788634
Chromosome Location . End  5791752 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0414.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000772 cpb-3 B0414.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0414.5 B0414.5 2238   I: 5789170-5789381

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0414.5.1 5788634 5791752 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13997   748   I: 5788634-5789381 Caenorhabditis elegans
Exon13998   213   I: 5789457-5789669 Caenorhabditis elegans
Exon13999   601   I: 5789746-5790346 Caenorhabditis elegans
Exon14000   159   I: 5790421-5790579 Caenorhabditis elegans
Exon14001   930   I: 5790624-5791553 Caenorhabditis elegans
Exon14002   152   I: 5791601-5791752 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0414.5.1 5788634 5791752 -1

1 Sequence

Length
2803

1 Sequence Ontology Term

Identifier Name Description
transcript