WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0414.7a.2 Sequence Name  B0414.7a.2
Length (nt)  4440   Chromosome Location  I: 5795400-5801305
Chromosome . Primary Identifier  I Chromosome Location . Start  5795400
Chromosome Location . End  5801305 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0414.7a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003472 mtk-1 B0414.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0414.7a B0414.7a 4257   I: 5795564-5795641

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0414.7a.2 5795400 5801305 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14009   242   I: 5795400-5795641 Caenorhabditis elegans
Exon14013   156   I: 5795690-5795845 Caenorhabditis elegans
Exon14016   629   I: 5795922-5796550 Caenorhabditis elegans
Exon14019   124   I: 5796598-5796721 Caenorhabditis elegans
Exon14022   507   I: 5796878-5797384 Caenorhabditis elegans
Exon14025   105   I: 5797434-5797538 Caenorhabditis elegans
Exon14028   132   I: 5797580-5797711 Caenorhabditis elegans
Exon14031   786   I: 5798049-5798834 Caenorhabditis elegans
Exon14034   633   I: 5798879-5799511 Caenorhabditis elegans
Exon14037   263   I: 5799699-5799961 Caenorhabditis elegans
Exon14040   226   I: 5800197-5800422 Caenorhabditis elegans
Exon14043   363   I: 5800471-5800833 Caenorhabditis elegans
Exon14046   74   I: 5800883-5800956 Caenorhabditis elegans
Exon14049   92   I: 5801017-5801108 Caenorhabditis elegans
Exon14053   108   I: 5801198-5801305 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0414.7a.2 5795400 5801305 -1

1 Sequence

Length
4440

1 Sequence Ontology Term

Identifier Name Description
transcript