WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0414.7a.1 Sequence Name  B0414.7a.1
Length (nt)  4480   Chromosome Location  I: 5795400-5803734
Chromosome . Primary Identifier  I Chromosome Location . Start  5795400
Chromosome Location . End  5803734 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0414.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003472 mtk-1 B0414.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0414.7a B0414.7a 4257   I: 5795564-5795641

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0414.7a.1 5795400 5803734 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14010   242   I: 5795400-5795641 Caenorhabditis elegans
Exon14012   156   I: 5795690-5795845 Caenorhabditis elegans
Exon14015   629   I: 5795922-5796550 Caenorhabditis elegans
Exon14018   124   I: 5796598-5796721 Caenorhabditis elegans
Exon14021   507   I: 5796878-5797384 Caenorhabditis elegans
Exon14024   105   I: 5797434-5797538 Caenorhabditis elegans
Exon14027   132   I: 5797580-5797711 Caenorhabditis elegans
Exon14030   786   I: 5798049-5798834 Caenorhabditis elegans
Exon14033   633   I: 5798879-5799511 Caenorhabditis elegans
Exon14036   263   I: 5799699-5799961 Caenorhabditis elegans
Exon14039   226   I: 5800197-5800422 Caenorhabditis elegans
Exon14042   363   I: 5800471-5800833 Caenorhabditis elegans
Exon14045   74   I: 5800883-5800956 Caenorhabditis elegans
Exon14048   92   I: 5801017-5801108 Caenorhabditis elegans
Exon14052   102   I: 5801198-5801299 Caenorhabditis elegans
Exon14059   46   I: 5803689-5803734 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0414.7a.1 5795400 5803734 -1

1 Sequence

Length
4480

1 Sequence Ontology Term

Identifier Name Description
transcript