WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0414.8b.1 Sequence Name  B0414.8b.1
Length (nt)  1758   Chromosome Location  I: 5804873-5807241
Chromosome . Primary Identifier  I Chromosome Location . Start  5804873
Chromosome Location . End  5807241 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0414.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015176 vps-51 B0414.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0414.8b B0414.8b 1758   I: 5804873-5804926

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0414.8b.1 5804873 5807241 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14063   54   I: 5804873-5804926 Caenorhabditis elegans
Exon14065   94   I: 5805148-5805241 Caenorhabditis elegans
Exon14067   298   I: 5805295-5805592 Caenorhabditis elegans
Exon14069   154   I: 5805659-5805812 Caenorhabditis elegans
Exon14071   330   I: 5805883-5806212 Caenorhabditis elegans
Exon14073   432   I: 5806261-5806692 Caenorhabditis elegans
Exon14075   162   I: 5806752-5806913 Caenorhabditis elegans
Exon14077   175   I: 5806965-5807139 Caenorhabditis elegans
Exon14078   59   I: 5807183-5807241 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0414.8b.1 5804873 5807241 -1

1 Sequence

Length
1758

1 Sequence Ontology Term

Identifier Name Description
transcript