WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33D11.2.2 Sequence Name  F33D11.2.2
Length (nt)  1178   Chromosome Location  I: 5847594-5849424
Chromosome . Primary Identifier  I Chromosome Location . Start  5847594
Chromosome Location . End  5849424 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33D11.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018001 F33D11.2 F33D11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D11.2 F33D11.2 1128   I: 5847611-5847672

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33D11.2.2 5847594 5849424 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14172   79   I: 5847594-5847672 Caenorhabditis elegans
Exon14175   118   I: 5847789-5847906 Caenorhabditis elegans
Exon14177   285   I: 5848216-5848500 Caenorhabditis elegans
Exon14179   240   I: 5848547-5848786 Caenorhabditis elegans
Exon14181   351   I: 5848917-5849267 Caenorhabditis elegans
Exon14183   105   I: 5849320-5849424 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33D11.2.2 5847594 5849424 1

1 Sequence

Length
1178

1 Sequence Ontology Term

Identifier Name Description
transcript