WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33D11.7.1 Sequence Name  F33D11.7.1
Length (nt)  1155   Chromosome Location  I: 5850034-5851893
Chromosome . Primary Identifier  I Chromosome Location . Start  5850034
Chromosome Location . End  5851893 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33D11.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018004 F33D11.7 F33D11.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D11.7 F33D11.7 1044   I: 5850080-5850151

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33D11.7.1 5850034 5851893 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14184   118   I: 5850034-5850151 Caenorhabditis elegans
Exon14185   87   I: 5850203-5850289 Caenorhabditis elegans
Exon14186   105   I: 5850332-5850436 Caenorhabditis elegans
Exon14187   219   I: 5850502-5850720 Caenorhabditis elegans
Exon14188   84   I: 5850764-5850847 Caenorhabditis elegans
Exon14189   96   I: 5850892-5850987 Caenorhabditis elegans
Exon14190   70   I: 5851195-5851264 Caenorhabditis elegans
Exon14191   95   I: 5851306-5851400 Caenorhabditis elegans
Exon14192   114   I: 5851563-5851676 Caenorhabditis elegans
Exon14193   167   I: 5851727-5851893 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33D11.7.1 5850034 5851893 -1

1 Sequence

Length
1155

1 Sequence Ontology Term

Identifier Name Description
transcript