WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33D11.9a.3 Sequence Name  F33D11.9a.3
Length (nt)  2026   Chromosome Location  I: 5857545-5862309
Chromosome . Primary Identifier  I Chromosome Location . Start  5857545
Chromosome Location . End  5862309 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33D11.9a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018006 gpaa-1 F33D11.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D11.9a F33D11.9a 849   I: 5857740-5858124

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33D11.9a.3 5857545 5862309 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14205   580   I: 5857545-5858124 Caenorhabditis elegans
Exon14221   159   I: 5858732-5858890 Caenorhabditis elegans
Exon14232   345   I: 5859276-5859620 Caenorhabditis elegans
Exon14240   116   I: 5859918-5860033 Caenorhabditis elegans
Exon14249   111   I: 5860627-5860737 Caenorhabditis elegans
Exon14256   613   I: 5861182-5861794 Caenorhabditis elegans
Exon14266   102   I: 5862208-5862309 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33D11.9a.3 5857545 5862309 -1

1 Sequence

Length
2026

1 Sequence Ontology Term

Identifier Name Description
transcript