WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33D11.9a.1 Sequence Name  F33D11.9a.1
Length (nt)  1081   Chromosome Location  I: 5857548-5859620
Chromosome . Primary Identifier  I Chromosome Location . Start  5857548
Chromosome Location . End  5859620 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33D11.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018006 gpaa-1 F33D11.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D11.9a F33D11.9a 849   I: 5857740-5858124

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33D11.9a.1 5857548 5859620 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14207   577   I: 5857548-5858124 Caenorhabditis elegans
Exon14219   159   I: 5858732-5858890 Caenorhabditis elegans
Exon14230   345   I: 5859276-5859620 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33D11.9a.1 5857548 5859620 -1

1 Sequence

Length
1081

1 Sequence Ontology Term

Identifier Name Description
transcript