WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33D11.12.1 Sequence Name  F33D11.12.1
Length (nt)  1359   Chromosome Location  I: 5862644-5866431
Chromosome . Primary Identifier  I Chromosome Location . Start  5862644
Chromosome Location . End  5866431 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33D11.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018009 dhhc-3 F33D11.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D11.12 F33D11.12 783   I: 5863030-5863180

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33D11.12.1 5862644 5866431 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14273   537   I: 5862644-5863180 Caenorhabditis elegans
Exon14275   233   I: 5863930-5864162 Caenorhabditis elegans
Exon14278   243   I: 5864225-5864467 Caenorhabditis elegans
Exon14282   232   I: 5864512-5864743 Caenorhabditis elegans
Exon14286   68   I: 5864975-5865042 Caenorhabditis elegans
Exon14288   46   I: 5866386-5866431 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33D11.12.1 5862644 5866431 -1

1 Sequence

Length
1359

1 Sequence Ontology Term

Identifier Name Description
transcript