WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34G6.6a.1 Sequence Name  C34G6.6a.1
Length (nt)  3762   Chromosome Location  I: 5874422-5878954
Chromosome . Primary Identifier  I Chromosome Location . Start  5874422
Chromosome Location . End  5878954 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34G6.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016422 noah-1 C34G6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34G6.6a C34G6.6a 3147   I: 5874972-5875184

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34G6.6a.1 5874422 5878954 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14308   763   I: 5874422-5875184 Caenorhabditis elegans
Exon14310   77   I: 5875293-5875369 Caenorhabditis elegans
Exon14312   1289   I: 5875416-5876704 Caenorhabditis elegans
Exon14315   139   I: 5876754-5876892 Caenorhabditis elegans
Exon14318   449   I: 5877074-5877522 Caenorhabditis elegans
Exon14321   403   I: 5877570-5877972 Caenorhabditis elegans
Exon14324   519   I: 5878126-5878644 Caenorhabditis elegans
Exon14327   123   I: 5878832-5878954 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34G6.6a.1 5874422 5878954 -1

1 Sequence

Length
3762

1 Sequence Ontology Term

Identifier Name Description
transcript