WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34G6.4b.1 Sequence Name  C34G6.4b.1
Length (nt)  3891   Chromosome Location  I: 5886625-5895636
Chromosome . Primary Identifier  I Chromosome Location . Start  5886625
Chromosome Location . End  5895636 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34G6.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003996 pgp-2 C34G6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34G6.4b C34G6.4b 3891   I: 5886625-5886698

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34G6.4b.1 5886625 5895636 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14334   74   I: 5886625-5886698 Caenorhabditis elegans
Exon14338   155   I: 5889037-5889191 Caenorhabditis elegans
Exon14342   100   I: 5890044-5890143 Caenorhabditis elegans
Exon14346   219   I: 5890363-5890581 Caenorhabditis elegans
Exon14350   472   I: 5890750-5891221 Caenorhabditis elegans
Exon14354   619   I: 5891424-5892042 Caenorhabditis elegans
Exon14358   303   I: 5892173-5892475 Caenorhabditis elegans
Exon14362   113   I: 5892520-5892632 Caenorhabditis elegans
Exon14365   72   I: 5893163-5893234 Caenorhabditis elegans
Exon14368   147   I: 5893424-5893570 Caenorhabditis elegans
Exon14372   954   I: 5893620-5894573 Caenorhabditis elegans
Exon14376   105   I: 5894814-5894918 Caenorhabditis elegans
Exon14380   204   I: 5894966-5895169 Caenorhabditis elegans
Exon14384   147   I: 5895216-5895362 Caenorhabditis elegans
Exon14387   207   I: 5895430-5895636 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34G6.4b.1 5886625 5895636 1

1 Sequence

Length
3891

1 Sequence Ontology Term

Identifier Name Description
transcript