WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34G6.4d.1 Sequence Name  C34G6.4d.1
Length (nt)  4331   Chromosome Location  I: 5888668-5895973
Chromosome . Primary Identifier  I Chromosome Location . Start  5888668
Chromosome Location . End  5895973 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34G6.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003996 pgp-2 C34G6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34G6.4d C34G6.4d 3798   I: 5888864-5888916

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34G6.4d.1 5888668 5895973 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14335   249   I: 5888668-5888916 Caenorhabditis elegans
Exon14340   155   I: 5889037-5889191 Caenorhabditis elegans
Exon14344   100   I: 5890044-5890143 Caenorhabditis elegans
Exon14348   219   I: 5890363-5890581 Caenorhabditis elegans
Exon14352   472   I: 5890750-5891221 Caenorhabditis elegans
Exon14356   619   I: 5891424-5892042 Caenorhabditis elegans
Exon14360   303   I: 5892173-5892475 Caenorhabditis elegans
Exon14364   113   I: 5892520-5892632 Caenorhabditis elegans
Exon14370   147   I: 5893424-5893570 Caenorhabditis elegans
Exon14374   954   I: 5893620-5894573 Caenorhabditis elegans
Exon14378   105   I: 5894814-5894918 Caenorhabditis elegans
Exon14382   204   I: 5894966-5895169 Caenorhabditis elegans
Exon14386   147   I: 5895216-5895362 Caenorhabditis elegans
Exon14390   544   I: 5895430-5895973 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34G6.4d.1 5888668 5895973 1

1 Sequence

Length
4331

1 Sequence Ontology Term

Identifier Name Description
transcript