WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0207.5a.1 Sequence Name  B0207.5a.1
Length (nt)  11033   Chromosome Location  I: 5919055-5935416
Chromosome . Primary Identifier  I Chromosome Location . Start  5919055
Chromosome Location . End  5935416 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0207.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015028 B0207.5 B0207.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0207.5a B0207.5a 10965   I: 5919055-5919515

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0207.5a.1 5919055 5935416 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14442   461   I: 5919055-5919515 Caenorhabditis elegans
Exon14444   694   I: 5920208-5920901 Caenorhabditis elegans
Exon14446   78   I: 5921097-5921174 Caenorhabditis elegans
Exon14448   261   I: 5921223-5921483 Caenorhabditis elegans
Exon14450   111   I: 5921866-5921976 Caenorhabditis elegans
Exon14452   162   I: 5922078-5922239 Caenorhabditis elegans
Exon14454   243   I: 5922597-5922839 Caenorhabditis elegans
Exon14456   414   I: 5922905-5923318 Caenorhabditis elegans
Exon14458   246   I: 5923373-5923618 Caenorhabditis elegans
Exon14460   252   I: 5924038-5924289 Caenorhabditis elegans
Exon14462   258   I: 5924362-5924619 Caenorhabditis elegans
Exon14464   192   I: 5924679-5924870 Caenorhabditis elegans
Exon14466   756   I: 5925167-5925922 Caenorhabditis elegans
Exon14468   513   I: 5926349-5926861 Caenorhabditis elegans
Exon14470   444   I: 5927082-5927525 Caenorhabditis elegans
Exon14472   603   I: 5927735-5928337 Caenorhabditis elegans
Exon14474   126   I: 5928385-5928510 Caenorhabditis elegans
Exon14476   465   I: 5928854-5929318 Caenorhabditis elegans
Exon14478   267   I: 5929378-5929644 Caenorhabditis elegans
Exon14480   366   I: 5929701-5930066 Caenorhabditis elegans
Exon14482   252   I: 5930286-5930537 Caenorhabditis elegans
Exon14484   3490   I: 5930652-5934141 Caenorhabditis elegans
Exon14487   105   I: 5934217-5934321 Caenorhabditis elegans
Exon14488   80   I: 5934573-5934652 Caenorhabditis elegans
Exon14491   194   I: 5935223-5935416 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0207.5a.1 5919055 5935416 1

1 Sequence

Length
11033

1 Sequence Ontology Term

Identifier Name Description
transcript