WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0207.12b.1 Sequence Name  B0207.12b.1
Length (nt)  1461   Chromosome Location  I: 5967247-5973320
Chromosome . Primary Identifier  I Chromosome Location . Start  5967247
Chromosome Location . End  5973320 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0207.12b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000232 avr-14 B0207.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0207.12b B0207.12b 1293   I: 5967415-5967455

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0207.12b.1 5967247 5973320 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14572   209   I: 5967247-5967455 Caenorhabditis elegans
Exon14577   95   I: 5967505-5967599 Caenorhabditis elegans
Exon14582   113   I: 5967839-5967951 Caenorhabditis elegans
Exon14586   102   I: 5968132-5968233 Caenorhabditis elegans
Exon14591   105   I: 5968600-5968704 Caenorhabditis elegans
Exon14597   76   I: 5968811-5968886 Caenorhabditis elegans
Exon14599   49   I: 5968955-5969003 Caenorhabditis elegans
Exon14631   141   I: 5970303-5970443 Caenorhabditis elegans
Exon14635   83   I: 5970766-5970848 Caenorhabditis elegans
Exon14640   81   I: 5970902-5970982 Caenorhabditis elegans
Exon14645   89   I: 5971370-5971458 Caenorhabditis elegans
Exon14650   161   I: 5972583-5972743 Caenorhabditis elegans
Exon14653   157   I: 5973164-5973320 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0207.12b.1 5967247 5973320 -1

1 Sequence

Length
1461

1 Sequence Ontology Term

Identifier Name Description
transcript