WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0207.12a.1 Sequence Name  B0207.12a.1
Length (nt)  2118   Chromosome Location  I: 5967249-5973320
Chromosome . Primary Identifier  I Chromosome Location . Start  5967249
Chromosome Location . End  5973320 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0207.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000232 avr-14 B0207.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0207.12a B0207.12a 1251   I: 5969124-5969152

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0207.12a.1 5967249 5973320 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14573   207   I: 5967249-5967455 Caenorhabditis elegans
Exon14576   95   I: 5967505-5967599 Caenorhabditis elegans
Exon14581   113   I: 5967839-5967951 Caenorhabditis elegans
Exon14584   102   I: 5968132-5968233 Caenorhabditis elegans
Exon14588   105   I: 5968600-5968704 Caenorhabditis elegans
Exon14594   76   I: 5968811-5968886 Caenorhabditis elegans
Exon14600   198   I: 5968955-5969152 Caenorhabditis elegans
Exon14604   31   I: 5969202-5969232 Caenorhabditis elegans
Exon14609   135   I: 5969440-5969574 Caenorhabditis elegans
Exon14613   114   I: 5969619-5969732 Caenorhabditis elegans
Exon14617   77   I: 5969838-5969914 Caenorhabditis elegans
Exon14621   88   I: 5969993-5970080 Caenorhabditis elegans
Exon14625   65   I: 5970129-5970193 Caenorhabditis elegans
Exon14628   141   I: 5970303-5970443 Caenorhabditis elegans
Exon14632   83   I: 5970766-5970848 Caenorhabditis elegans
Exon14637   81   I: 5970902-5970982 Caenorhabditis elegans
Exon14642   89   I: 5971370-5971458 Caenorhabditis elegans
Exon14647   161   I: 5972583-5972743 Caenorhabditis elegans
Exon14652   157   I: 5973164-5973320 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0207.12a.1 5967249 5973320 -1

1 Sequence

Length
2118

1 Sequence Ontology Term

Identifier Name Description
transcript