WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0207.12a.2 Sequence Name  B0207.12a.2
Length (nt)  2017   Chromosome Location  I: 5967644-5973326
Chromosome . Primary Identifier  I Chromosome Location . Start  5967644
Chromosome Location . End  5973326 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0207.12a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000232 avr-14 B0207.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0207.12a B0207.12a 1251   I: 5969124-5969152

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0207.12a.2 5967644 5973326 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14580   308   I: 5967644-5967951 Caenorhabditis elegans
Exon14585   102   I: 5968132-5968233 Caenorhabditis elegans
Exon14589   105   I: 5968600-5968704 Caenorhabditis elegans
Exon14595   76   I: 5968811-5968886 Caenorhabditis elegans
Exon14601   198   I: 5968955-5969152 Caenorhabditis elegans
Exon14605   31   I: 5969202-5969232 Caenorhabditis elegans
Exon14610   135   I: 5969440-5969574 Caenorhabditis elegans
Exon14614   114   I: 5969619-5969732 Caenorhabditis elegans
Exon14618   77   I: 5969838-5969914 Caenorhabditis elegans
Exon14622   88   I: 5969993-5970080 Caenorhabditis elegans
Exon14626   65   I: 5970129-5970193 Caenorhabditis elegans
Exon14629   141   I: 5970303-5970443 Caenorhabditis elegans
Exon14633   83   I: 5970766-5970848 Caenorhabditis elegans
Exon14638   81   I: 5970902-5970982 Caenorhabditis elegans
Exon14643   89   I: 5971370-5971458 Caenorhabditis elegans
Exon14648   161   I: 5972583-5972743 Caenorhabditis elegans
Exon14655   163   I: 5973164-5973326 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0207.12a.2 5967644 5973326 -1

1 Sequence

Length
2017

1 Sequence Ontology Term

Identifier Name Description
transcript