WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06A5.7a.2 Sequence Name  C06A5.7a.2
Length (nt)  2167   Chromosome Location  I: 5992661-6001122
Chromosome . Primary Identifier  I Chromosome Location . Start  5992661
Chromosome Location . End  6001122 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06A5.7a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006823 unc-94 C06A5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06A5.7a C06A5.7a 1179   I: 5993301-5993338

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06A5.7a.2 5992661 6001122 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14736   678   I: 5992661-5993338 Caenorhabditis elegans
Exon14739   148   I: 5994047-5994194 Caenorhabditis elegans
Exon14742   144   I: 5994918-5995061 Caenorhabditis elegans
Exon14745   96   I: 5995227-5995322 Caenorhabditis elegans
Exon14748   67   I: 5995377-5995443 Caenorhabditis elegans
Exon14751   163   I: 5995651-5995813 Caenorhabditis elegans
Exon14754   322   I: 5995895-5996216 Caenorhabditis elegans
Exon14759   87   I: 5998578-5998664 Caenorhabditis elegans
Exon14761   94   I: 5998710-5998803 Caenorhabditis elegans
Exon14765   368   I: 6000755-6001122 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06A5.7a.2 5992661 6001122 -1

1 Sequence

Length
2167

1 Sequence Ontology Term

Identifier Name Description
transcript