WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06A5.8a.1 Sequence Name  C06A5.8a.1
Length (nt)  947   Chromosome Location  I: 6008137-6009524
Chromosome . Primary Identifier  I Chromosome Location . Start  6008137
Chromosome Location . End  6009524 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06A5.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015505 C06A5.8 C06A5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06A5.8a C06A5.8a 852   I: 6008226-6008330

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06A5.8a.1 6008137 6009524 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14774   194   I: 6008137-6008330 Caenorhabditis elegans
Exon14777   245   I: 6008496-6008740 Caenorhabditis elegans
Exon14780   198   I: 6008792-6008989 Caenorhabditis elegans
Exon14783   175   I: 6009116-6009290 Caenorhabditis elegans
Exon14786   80   I: 6009341-6009420 Caenorhabditis elegans
Exon14789   55   I: 6009470-6009524 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06A5.8a.1 6008137 6009524 -1

1 Sequence

Length
947

1 Sequence Ontology Term

Identifier Name Description
transcript