WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06A5.1.1 Sequence Name  C06A5.1.1
Length (nt)  6419   Chromosome Location  I: 6011977-6022666
Chromosome . Primary Identifier  I Chromosome Location . Start  6011977
Chromosome Location . End  6022666 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06A5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015499 ints-1 C06A5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06A5.1 C06A5.1 5655   I: 6012058-6012253

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06A5.1.1 6011977 6022666 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14801   277   I: 6011977-6012253 Caenorhabditis elegans
Exon14802   263   I: 6012308-6012570 Caenorhabditis elegans
Exon14803   365   I: 6012629-6012993 Caenorhabditis elegans
Exon14804   667   I: 6013219-6013885 Caenorhabditis elegans
Exon14805   402   I: 6014147-6014548 Caenorhabditis elegans
Exon14806   500   I: 6014918-6015417 Caenorhabditis elegans
Exon14807   286   I: 6015704-6015989 Caenorhabditis elegans
Exon14808   330   I: 6016329-6016658 Caenorhabditis elegans
Exon14809   282   I: 6017037-6017318 Caenorhabditis elegans
Exon14810   225   I: 6017628-6017852 Caenorhabditis elegans
Exon14811   312   I: 6018068-6018379 Caenorhabditis elegans
Exon14812   186   I: 6018589-6018774 Caenorhabditis elegans
Exon14813   600   I: 6019202-6019801 Caenorhabditis elegans
Exon14814   54   I: 6019853-6019906 Caenorhabditis elegans
Exon14815   133   I: 6020079-6020211 Caenorhabditis elegans
Exon14816   442   I: 6020497-6020938 Caenorhabditis elegans
Exon14817   64   I: 6021052-6021115 Caenorhabditis elegans
Exon14818   228   I: 6021314-6021541 Caenorhabditis elegans
Exon14819   803   I: 6021864-6022666 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06A5.1.1 6011977 6022666 1

1 Sequence

Length
6419

1 Sequence Ontology Term

Identifier Name Description
transcript