WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0025.1c.1 Sequence Name  B0025.1c.1
Length (nt)  2696   Chromosome Location  I: 6028498-6033364
Chromosome . Primary Identifier  I Chromosome Location . Start  6028498
Chromosome Location . End  6033364 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0025.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006932 vps-34 B0025.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0025.1c B0025.1c 2694   I: 6028500-6028649

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0025.1c.1 6028498 6033364 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14840   152   I: 6028498-6028649 Caenorhabditis elegans
Exon14842   591   I: 6029159-6029749 Caenorhabditis elegans
Exon14844   707   I: 6029949-6030655 Caenorhabditis elegans
Exon14846   586   I: 6031059-6031644 Caenorhabditis elegans
Exon14849   522   I: 6032187-6032708 Caenorhabditis elegans
Exon14850   138   I: 6033227-6033364 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0025.1c.1 6028498 6033364 1

1 Sequence

Length
2696

1 Sequence Ontology Term

Identifier Name Description
transcript