WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27A12.10.1 Sequence Name  C27A12.10.1
Length (nt)  770   Chromosome Location  I: 6064088-6065298
Chromosome . Primary Identifier  I Chromosome Location . Start  6064088
Chromosome Location . End  6065298 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A12.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023409 mbd-2 C27A12.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27A12.10 C27A12.10 633   I: 6064092-6064271

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27A12.10.1 6064088 6065298 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14919   184   I: 6064088-6064271 Caenorhabditis elegans
Exon14920   126   I: 6064404-6064529 Caenorhabditis elegans
Exon14921   225   I: 6064657-6064881 Caenorhabditis elegans
Exon14922   235   I: 6065064-6065298 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27A12.10.1 6064088 6065298 1

1 Sequence

Length
770

1 Sequence Ontology Term

Identifier Name Description
transcript