WormMine: Gene WBGene00044933

• WormBase Gene ID: WBGene00044933
• Gene Name: ZK484.9
• Sequence Name: ZK484.9
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by daf-2 and mys-1 based on RNA-seq studies.
• Biotype: SO:0001267
• Genetic Position: :±
• Length (nt): 68

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00044933

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:ZK484.9	ZK484.9	68	I: 6082738-6082805

Other

0 CDSs

2 RNAi Result

• WBRNAi00002327
• WBRNAi00038304

6 Allele

• gk962858
• gk962706
• gk963902
• gk964505
• gk964347
• gk23

1 Chromosome

• WormBase ID: I
• Organism: Caenorhabditis elegans
• Length (nt): 15072434

1 Chromosome Location

• Feature . Primary Identifier: WBGene00044933
• Start: 6082738
• End: 6082805
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

5 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts depleted in purified oocyte P bodies comparing to in whole oocytes.	DESeq2, FDR < 0.05, fold change > 2.	WBPaper00065975:P-body_vs_oocyte_depleted
	Transcripts depleted in purified oocyte P bodies comparing to in the whole animal.	DESeq2, FDR < 0.05, fold change > 2.	WBPaper00065975:P-body_vs_WholeAnimal_depleted
	mRNAs that showed significantly decreased expression in polysomal fractions in daf-2(e1370) comparing to in daf-2(e1370);daf-16(mu86), according to RNAseq study.	Differentially expressed genes were determined using cuffdiff across all pairs.	WBPaper00046337:polysomal_daf-2_vs_daf-2;daf-16_downregulated
	mRNAs that showed significantly decreased expression in polysomal fractions in N2 comparing to in daf-2(e1370), according to RNAseq study.	Differentially expressed genes were determined using cuffdiff across all pairs.	WBPaper00046337:polysomal_N2_vs_daf-2_downregulated
	Transcripts that showed significantly decreased expression in her-1(e1520);sdc-2(y74);mys-1(RNAi) comparing to in her-1(e1520);sdc-2(y74) RNAi control animals, during L3 stage.	DESeq v1.6.3. Fold change > 1.5.	WBPaper00050370:mys-1(RNAi)_L3_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00044933
• Start: 6082738
• End: 6082805
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 68

1 Sequence Ontology Term