WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56F4.2.1 Sequence Name  F56F4.2.1
Length (nt)  513   Chromosome Location  I: 6145455-6146477
Chromosome . Primary Identifier  I Chromosome Location . Start  6145455
Chromosome Location . End  6146477 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56F4.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018979 ttr-55 F56F4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56F4.2 F56F4.2 459   I: 6145509-6145532

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56F4.2.1 6145455 6146477 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15171   78   I: 6145455-6145532 Caenorhabditis elegans
Exon15172   133   I: 6145997-6146129 Caenorhabditis elegans
Exon15173   302   I: 6146176-6146477 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56F4.2.1 6145455 6146477 1

1 Sequence

Length
513

1 Sequence Ontology Term

Identifier Name Description
transcript