WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09B4.3.1 Sequence Name  T09B4.3.1
Length (nt)  1740   Chromosome Location  I: 6175195-6178065
Chromosome . Primary Identifier  I Chromosome Location . Start  6175195
Chromosome Location . End  6178065 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09B4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020377 T09B4.3 T09B4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09B4.3 T09B4.3 552   I: 6176380-6176488

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09B4.3.1 6175195 6178065 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15227   1004   I: 6175195-6176198 Caenorhabditis elegans
Exon15229   237   I: 6176252-6176488 Caenorhabditis elegans
Exon15230   110   I: 6176533-6176642 Caenorhabditis elegans
Exon15235   128   I: 6177632-6177759 Caenorhabditis elegans
Exon15237   261   I: 6177805-6178065 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09B4.3.1 6175195 6178065 1

1 Sequence

Length
1740

1 Sequence Ontology Term

Identifier Name Description
transcript