WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09B4.9.1 Sequence Name  T09B4.9.1
Length (nt)  1586   Chromosome Location  I: 6177934-6180840
Chromosome . Primary Identifier  I Chromosome Location . Start  6177934
Chromosome Location . End  6180840 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09B4.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020383 tin-44 T09B4.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09B4.9 T09B4.9 1278   I: 6178242-6178565

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09B4.9.1 6177934 6180840 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15239   632   I: 6177934-6178565 Caenorhabditis elegans
Exon15240   72   I: 6178667-6178738 Caenorhabditis elegans
Exon15241   95   I: 6178784-6178878 Caenorhabditis elegans
Exon15242   93   I: 6178922-6179014 Caenorhabditis elegans
Exon15243   86   I: 6179708-6179793 Caenorhabditis elegans
Exon15244   64   I: 6179842-6179905 Caenorhabditis elegans
Exon15245   64   I: 6180104-6180167 Caenorhabditis elegans
Exon15246   150   I: 6180218-6180367 Caenorhabditis elegans
Exon15247   81   I: 6180415-6180495 Caenorhabditis elegans
Exon15248   167   I: 6180544-6180710 Caenorhabditis elegans
Exon15249   82   I: 6180759-6180840 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09B4.9.1 6177934 6180840 -1

1 Sequence

Length
1586

1 Sequence Ontology Term

Identifier Name Description
transcript