WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T08B2.7a Sequence Name  T08B2.7a
Length (nt)  2346   Chromosome Location  I: 6207208-6207499
Chromosome . Primary Identifier  I Chromosome Location . Start  6207208
Chromosome Location . End  6207499
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B2.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE13431 ECH-1.2, isoform a 84.8 781 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00000549
WBRNAi00052844
WBRNAi00052845
WBRNAi00004170
WBRNAi00097980
WBRNAi00062051
WBRNAi00084383
WBRNAi00084405
WBRNAi00023306
WBRNAi00023582
WBRNAi00023816
WBRNAi00024104
WBRNAi00075801

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T08B2.7a 6207208 6207499 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020347 ech-1.2 T08B2.7 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T08B2.7a 6207208 6207499 -1
CDS:T08B2.7a 6207614 6208137 -1
CDS:T08B2.7a 6208184 6208684 -1
CDS:T08B2.7a 6208729 6209469 -1
CDS:T08B2.7a 6209534 6209746 -1
CDS:T08B2.7a 6209891 6209939 -1
CDS:T08B2.7a 6211082 6211107 -1

1 Sequence

Length
2346

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T08B2.7a.1 T08B2.7a.1 2647   I: 6206955-6211155