WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08B2.9b.3 Sequence Name  T08B2.9b.3
Length (nt)  1708   Chromosome Location  I: 6211987-6214585
Chromosome . Primary Identifier  I Chromosome Location . Start  6211987
Chromosome Location . End  6214585 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B2.9b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001497 fars-1 T08B2.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08B2.9b T08B2.9b 1491   I: 6212137-6212337

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08B2.9b.3 6211987 6214585 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15332   351   I: 6211987-6212337 Caenorhabditis elegans
Exon15336   264   I: 6212382-6212645 Caenorhabditis elegans
Exon15343   185   I: 6212996-6213180 Caenorhabditis elegans
Exon15347   245   I: 6213233-6213477 Caenorhabditis elegans
Exon15351   93   I: 6213524-6213616 Caenorhabditis elegans
Exon15355   200   I: 6213667-6213866 Caenorhabditis elegans
Exon15359   304   I: 6213913-6214216 Caenorhabditis elegans
Exon15362   66   I: 6214520-6214585 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08B2.9b.3 6211987 6214585 -1

1 Sequence

Length
1708

1 Sequence Ontology Term

Identifier Name Description
transcript