WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08B2.5e.3 Sequence Name  T08B2.5e.3
Length (nt)  3012   Chromosome Location  I: 6215773-6219907
Chromosome . Primary Identifier  I Chromosome Location . Start  6215773
Chromosome Location . End  6219907 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B2.5e.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020346 rbm-5 T08B2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08B2.5e T08B2.5e 555   I: 6215791-6215847

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08B2.5e.3 6215773 6219907 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15372   75   I: 6215773-6215847 Caenorhabditis elegans
Exon15384   69   I: 6215919-6215987 Caenorhabditis elegans
Exon15391   107   I: 6216062-6216168 Caenorhabditis elegans
Exon15392   498   I: 6216296-6216793 Caenorhabditis elegans
Exon15404   132   I: 6217123-6217254 Caenorhabditis elegans
Exon15411   150   I: 6217303-6217452 Caenorhabditis elegans
Exon15418   105   I: 6217500-6217604 Caenorhabditis elegans
Exon15425   118   I: 6217651-6217768 Caenorhabditis elegans
Exon15431   207   I: 6217818-6218024 Caenorhabditis elegans
Exon15438   117   I: 6218068-6218184 Caenorhabditis elegans
Exon15445   80   I: 6218230-6218309 Caenorhabditis elegans
Exon15452   163   I: 6218353-6218515 Caenorhabditis elegans
Exon15459   363   I: 6218564-6218926 Caenorhabditis elegans
Exon15466   281   I: 6218976-6219256 Caenorhabditis elegans
Exon15473   334   I: 6219316-6219649 Caenorhabditis elegans
Exon15476   213   I: 6219695-6219907 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08B2.5e.3 6215773 6219907 1

1 Sequence

Length
3012

1 Sequence Ontology Term

Identifier Name Description
transcript