WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08B2.5d.2 Sequence Name  T08B2.5d.2
Length (nt)  2952   Chromosome Location  I: 6215773-6219910
Chromosome . Primary Identifier  I Chromosome Location . Start  6215773
Chromosome Location . End  6219910 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B2.5d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020346 rbm-5 T08B2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08B2.5d T08B2.5d 492   I: 6215791-6215847

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08B2.5d.2 6215773 6219910 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15373   75   I: 6215773-6215847 Caenorhabditis elegans
Exon15381   69   I: 6215919-6215987 Caenorhabditis elegans
Exon15388   107   I: 6216062-6216168 Caenorhabditis elegans
Exon15397   435   I: 6216359-6216793 Caenorhabditis elegans
Exon15403   132   I: 6217123-6217254 Caenorhabditis elegans
Exon15408   150   I: 6217303-6217452 Caenorhabditis elegans
Exon15415   105   I: 6217500-6217604 Caenorhabditis elegans
Exon15422   118   I: 6217651-6217768 Caenorhabditis elegans
Exon15429   207   I: 6217818-6218024 Caenorhabditis elegans
Exon15436   117   I: 6218068-6218184 Caenorhabditis elegans
Exon15442   80   I: 6218230-6218309 Caenorhabditis elegans
Exon15449   163   I: 6218353-6218515 Caenorhabditis elegans
Exon15456   363   I: 6218564-6218926 Caenorhabditis elegans
Exon15463   281   I: 6218976-6219256 Caenorhabditis elegans
Exon15470   334   I: 6219316-6219649 Caenorhabditis elegans
Exon15478   216   I: 6219695-6219910 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08B2.5d.2 6215773 6219910 1

1 Sequence

Length
2952

1 Sequence Ontology Term

Identifier Name Description
transcript