WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08B2.5e.2 Sequence Name  T08B2.5e.2
Length (nt)  3344   Chromosome Location  I: 6215773-6219910
Chromosome . Primary Identifier  I Chromosome Location . Start  6215773
Chromosome Location . End  6219910 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B2.5e.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020346 rbm-5 T08B2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08B2.5e T08B2.5e 555   I: 6215791-6215847

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08B2.5e.2 6215773 6219910 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15374   75   I: 6215773-6215847 Caenorhabditis elegans
Exon15383   69   I: 6215919-6215987 Caenorhabditis elegans
Exon15390   107   I: 6216062-6216168 Caenorhabditis elegans
Exon15394   959   I: 6216296-6217254 Caenorhabditis elegans
Exon15410   150   I: 6217303-6217452 Caenorhabditis elegans
Exon15417   105   I: 6217500-6217604 Caenorhabditis elegans
Exon15424   118   I: 6217651-6217768 Caenorhabditis elegans
Exon15430   207   I: 6217818-6218024 Caenorhabditis elegans
Exon15437   117   I: 6218068-6218184 Caenorhabditis elegans
Exon15444   80   I: 6218230-6218309 Caenorhabditis elegans
Exon15451   163   I: 6218353-6218515 Caenorhabditis elegans
Exon15458   363   I: 6218564-6218926 Caenorhabditis elegans
Exon15465   281   I: 6218976-6219256 Caenorhabditis elegans
Exon15472   334   I: 6219316-6219649 Caenorhabditis elegans
Exon15479   216   I: 6219695-6219910 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08B2.5e.2 6215773 6219910 1

1 Sequence

Length
3344

1 Sequence Ontology Term

Identifier Name Description
transcript