WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08B2.5e.1 Sequence Name  T08B2.5e.1
Length (nt)  3382   Chromosome Location  I: 6215775-6219907
Chromosome . Primary Identifier  I Chromosome Location . Start  6215775
Chromosome Location . End  6219907 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B2.5e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020346 rbm-5 T08B2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08B2.5e T08B2.5e 555   I: 6215791-6215847

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08B2.5e.1 6215775 6219907 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15376   73   I: 6215775-6215847 Caenorhabditis elegans
Exon15382   69   I: 6215919-6215987 Caenorhabditis elegans
Exon15389   107   I: 6216062-6216168 Caenorhabditis elegans
Exon15393   959   I: 6216296-6217254 Caenorhabditis elegans
Exon15409   150   I: 6217303-6217452 Caenorhabditis elegans
Exon15416   105   I: 6217500-6217604 Caenorhabditis elegans
Exon15423   118   I: 6217651-6217768 Caenorhabditis elegans
Exon15432   367   I: 6217818-6218184 Caenorhabditis elegans
Exon15443   80   I: 6218230-6218309 Caenorhabditis elegans
Exon15450   163   I: 6218353-6218515 Caenorhabditis elegans
Exon15457   363   I: 6218564-6218926 Caenorhabditis elegans
Exon15464   281   I: 6218976-6219256 Caenorhabditis elegans
Exon15471   334   I: 6219316-6219649 Caenorhabditis elegans
Exon15475   213   I: 6219695-6219907 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08B2.5e.1 6215775 6219907 1

1 Sequence

Length
3382

1 Sequence Ontology Term

Identifier Name Description
transcript