WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48E7.6.1 Sequence Name  C48E7.6.1
Length (nt)  6485   Chromosome Location  I: 6236134-6249860
Chromosome . Primary Identifier  I Chromosome Location . Start  6236134
Chromosome Location . End  6249860 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48E7.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016751 C48E7.6 C48E7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48E7.6 C48E7.6 5991   I: 6236212-6236506

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C48E7.6.1 6236134 6249860 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15504   373   I: 6236134-6236506 Caenorhabditis elegans
Exon15505   85   I: 6237789-6237873 Caenorhabditis elegans
Exon15507   67   I: 6239157-6239223 Caenorhabditis elegans
Exon15508   99   I: 6239522-6239620 Caenorhabditis elegans
Exon15509   141   I: 6239670-6239810 Caenorhabditis elegans
Exon15510   347   I: 6240048-6240394 Caenorhabditis elegans
Exon15511   135   I: 6240437-6240571 Caenorhabditis elegans
Exon15512   211   I: 6240822-6241032 Caenorhabditis elegans
Exon15513   399   I: 6241127-6241525 Caenorhabditis elegans
Exon15514   78   I: 6241599-6241676 Caenorhabditis elegans
Exon15515   318   I: 6241726-6242043 Caenorhabditis elegans
Exon15516   224   I: 6242270-6242493 Caenorhabditis elegans
Exon15517   128   I: 6242589-6242716 Caenorhabditis elegans
Exon15518   233   I: 6242766-6242998 Caenorhabditis elegans
Exon15519   190   I: 6243230-6243419 Caenorhabditis elegans
Exon15520   179   I: 6243466-6243644 Caenorhabditis elegans
Exon15521   181   I: 6243689-6243869 Caenorhabditis elegans
Exon15522   156   I: 6243920-6244075 Caenorhabditis elegans
Exon15523   80   I: 6244120-6244199 Caenorhabditis elegans
Exon15524   69   I: 6244379-6244447 Caenorhabditis elegans
Exon15525   135   I: 6244521-6244655 Caenorhabditis elegans
Exon15526   231   I: 6244698-6244928 Caenorhabditis elegans
Exon15527   128   I: 6245148-6245275 Caenorhabditis elegans
Exon15528   154   I: 6245326-6245479 Caenorhabditis elegans
Exon15529   123   I: 6246797-6246919 Caenorhabditis elegans
Exon15530   129   I: 6246967-6247095 Caenorhabditis elegans
Exon15531   567   I: 6247215-6247781 Caenorhabditis elegans
Exon15532   159   I: 6248100-6248258 Caenorhabditis elegans
Exon15533   603   I: 6248314-6248916 Caenorhabditis elegans
Exon15534   563   I: 6249298-6249860 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C48E7.6.1 6236134 6249860 1

1 Sequence

Length
6485

1 Sequence Ontology Term

Identifier Name Description
transcript