WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48E7.11.1 Sequence Name  C48E7.11.1
Length (nt)  411   Chromosome Location  I: 6253082-6253584
Chromosome . Primary Identifier  I Chromosome Location . Start  6253082
Chromosome Location . End  6253584 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48E7.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016754 cebp-2 C48E7.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48E7.11 C48E7.11 303   I: 6253084-6253181

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C48E7.11.1 6253082 6253584 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15547   100   I: 6253082-6253181 Caenorhabditis elegans
Exon15548   88   I: 6253227-6253314 Caenorhabditis elegans
Exon15549   223   I: 6253362-6253584 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C48E7.11.1 6253082 6253584 1

1 Sequence

Length
411

1 Sequence Ontology Term

Identifier Name Description
transcript