WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48E7.2.1 Sequence Name  C48E7.2.1
Length (nt)  1742   Chromosome Location  I: 6255035-6257620
Chromosome . Primary Identifier  I Chromosome Location . Start  6255035
Chromosome Location . End  6257620 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48E7.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016750 let-611 C48E7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48E7.2 C48E7.2 1635   I: 6255042-6255104

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C48E7.2.1 6255035 6257620 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15555   70   I: 6255035-6255104 Caenorhabditis elegans
Exon15556   93   I: 6255150-6255242 Caenorhabditis elegans
Exon15557   122   I: 6255305-6255426 Caenorhabditis elegans
Exon15558   284   I: 6255475-6255758 Caenorhabditis elegans
Exon15559   320   I: 6256230-6256549 Caenorhabditis elegans
Exon15560   145   I: 6256609-6256753 Caenorhabditis elegans
Exon15561   212   I: 6256816-6257027 Caenorhabditis elegans
Exon15562   496   I: 6257125-6257620 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C48E7.2.1 6255035 6257620 1

1 Sequence

Length
1742

1 Sequence Ontology Term

Identifier Name Description
transcript