WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C48E7.1 Sequence Name  C48E7.1
Length (nt)  525   Chromosome Location  I: 6260263-6260390
Chromosome . Primary Identifier  I Chromosome Location . Start  6260263
Chromosome Location . End  6260390
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48E7.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE08816 C48E7.1 18.7 174 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00082435
WBRNAi00001183
WBRNAi00042736
WBRNAi00082699
WBRNAi00003193
WBRNAi00029945
WBRNAi00093009
WBRNAi00070812
WBRNAi00070813
WBRNAi00070814

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C48E7.1 6260263 6260390 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016749 C48E7.1 C48E7.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C48E7.1 6260263 6260390 1
CDS:C48E7.1 6261300 6261357 1
CDS:C48E7.1 6261414 6261509 1
CDS:C48E7.1 6262136 6262258 1
CDS:C48E7.1 6264150 6264269 1

1 Sequence

Length
525

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C48E7.1.1 C48E7.1.1 790   I: 6260249-6264520