WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10G11.5a.1 Sequence Name  C10G11.5a.1
Length (nt)  1578   Chromosome Location  I: 6295069-6297636
Chromosome . Primary Identifier  I Chromosome Location . Start  6295069
Chromosome Location . End  6297636 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10G11.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004068 pnk-1 C10G11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10G11.5a C10G11.5a 1350   I: 6295079-6295189

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10G11.5a.1 6295069 6297636 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15642   121   I: 6295069-6295189 Caenorhabditis elegans
Exon15645   59   I: 6295258-6295316 Caenorhabditis elegans
Exon15648   191   I: 6295907-6296097 Caenorhabditis elegans
Exon15652   167   I: 6296147-6296313 Caenorhabditis elegans
Exon15656   206   I: 6296368-6296573 Caenorhabditis elegans
Exon15660   176   I: 6296653-6296828 Caenorhabditis elegans
Exon15664   230   I: 6296874-6297103 Caenorhabditis elegans
Exon15669   120   I: 6297153-6297272 Caenorhabditis elegans
Exon15675   308   I: 6297329-6297636 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10G11.5a.1 6295069 6297636 1

1 Sequence

Length
1578

1 Sequence Ontology Term

Identifier Name Description
transcript