WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C10G11.5c Sequence Name  C10G11.5c
Length (nt)  1212   Chromosome Location  I: 6295285-6295316
Chromosome . Primary Identifier  I Chromosome Location . Start  6295285
Chromosome Location . End  6295316
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10G11.5c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33269 PNK-1, isoform c 45.1 403 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00070479
WBRNAi00067022
WBRNAi00067360
WBRNAi00067830
WBRNAi00067864
WBRNAi00067947
WBRNAi00067971
WBRNAi00068215
WBRNAi00040312
WBRNAi00085817
WBRNAi00002931
WBRNAi00024523
WBRNAi00028787
WBRNAi00116635
WBRNAi00024524
WBRNAi00110688
WBRNAi00087498
WBRNAi00088749
WBRNAi00088642
WBRNAi00070478
WBRNAi00070477

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C10G11.5c 6295285 6295316 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004068 pnk-1 C10G11.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C10G11.5c 6295285 6295316 1
CDS:C10G11.5c 6295907 6296097 1
CDS:C10G11.5c 6296147 6296313 1
CDS:C10G11.5c 6296368 6296573 1
CDS:C10G11.5c 6296653 6296828 1
CDS:C10G11.5c 6296874 6297103 1
CDS:C10G11.5c 6297153 6297272 1
CDS:C10G11.5c 6297329 6297418 1

1 Sequence

Length
1212

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C10G11.5c.2 C10G11.5c.2 1553   I: 6295067-6297634
Transcript:C10G11.5c.1 C10G11.5c.1 1455   I: 6295258-6297634