WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26B1.2d.2 Sequence Name  F26B1.2d.2
Length (nt)  2100   Chromosome Location  I: 6317697-6320336
Chromosome . Primary Identifier  I Chromosome Location . Start  6317697
Chromosome Location . End  6320336 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26B1.2d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017816 hrpk-1 F26B1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26B1.2d F26B1.2d 216   I: 6318047-6318114

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26B1.2d.2 6317697 6320336 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon15728   68   I: 6317697-6317764 Caenorhabditis elegans
Exon15737   71   I: 6318044-6318114 Caenorhabditis elegans
Exon15750   505   I: 6318160-6318664 Caenorhabditis elegans
Exon15767   609   I: 6318734-6319342 Caenorhabditis elegans
Exon15770   194   I: 6319442-6319635 Caenorhabditis elegans
Exon15776   653   I: 6319684-6320336 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26B1.2d.2 6317697 6320336 1

1 Sequence

Length
2100

1 Sequence Ontology Term

Identifier Name Description
transcript