WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R10A10.2.1 Sequence Name  R10A10.2.1
Length (nt)  568   Chromosome Location  I: 6420660-6421889
Chromosome . Primary Identifier  I Chromosome Location . Start  6420660
Chromosome Location . End  6421889 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R10A10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019993 rbx-2 R10A10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R10A10.2 R10A10.2 339   I: 6420849-6421012

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R10A10.2.1 6420660 6421889 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16144   353   I: 6420660-6421012 Caenorhabditis elegans
Exon16145   125   I: 6421621-6421745 Caenorhabditis elegans
Exon16146   90   I: 6421800-6421889 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R10A10.2.1 6420660 6421889 -1

1 Sequence

Length
568

1 Sequence Ontology Term

Identifier Name Description
transcript