WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F37E3.1.1 Sequence Name  F37E3.1.1
Length (nt)  2683   Chromosome Location  I: 6422061-6425794
Chromosome . Primary Identifier  I Chromosome Location . Start  6422061
Chromosome Location . End  6425794 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F37E3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018156 ncbp-1 F37E3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F37E3.1 F37E3.1 2397   I: 6422106-6422130

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F37E3.1.1 6422061 6425794 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16147   70   I: 6422061-6422130 Caenorhabditis elegans
Exon16148   95   I: 6422187-6422281 Caenorhabditis elegans
Exon16149   516   I: 6422327-6422842 Caenorhabditis elegans
Exon16150   270   I: 6422892-6423161 Caenorhabditis elegans
Exon16151   223   I: 6423273-6423495 Caenorhabditis elegans
Exon16152   118   I: 6423589-6423706 Caenorhabditis elegans
Exon16153   79   I: 6423750-6423828 Caenorhabditis elegans
Exon16154   154   I: 6423879-6424032 Caenorhabditis elegans
Exon16155   205   I: 6424076-6424280 Caenorhabditis elegans
Exon16156   201   I: 6424597-6424797 Caenorhabditis elegans
Exon16157   142   I: 6424845-6424986 Caenorhabditis elegans
Exon16158   123   I: 6425032-6425154 Caenorhabditis elegans
Exon16159   132   I: 6425203-6425334 Caenorhabditis elegans
Exon16160   355   I: 6425440-6425794 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F37E3.1.1 6422061 6425794 1

1 Sequence

Length
2683

1 Sequence Ontology Term

Identifier Name Description
transcript