WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F37E3.1 Sequence Name  F37E3.1
Length (nt)  2397   Chromosome Location  I: 6422106-6422130
Chromosome . Primary Identifier  I Chromosome Location . Start  6422106
Chromosome Location . End  6422130
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F37E3.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29793 NCBP-1 92.5 798 Caenorhabditis elegans
 

Other

29 RNAi

WormBase ID
WBRNAi00094309
WBRNAi00000049
WBRNAi00025428
WBRNAi00075255
WBRNAi00075254
WBRNAi00031924
WBRNAi00106869
WBRNAi00083622
WBRNAi00083724
WBRNAi00083814
WBRNAi00094036
WBRNAi00070997
WBRNAi00084649
WBRNAi00081418
WBRNAi00025427
WBRNAi00046644
WBRNAi00000176
WBRNAi00082164
WBRNAi00117155
WBRNAi00087047
WBRNAi00087049
WBRNAi00087048
WBRNAi00084653
WBRNAi00111959
WBRNAi00087050
WBRNAi00087051
WBRNAi00087198
WBRNAi00064459
WBRNAi00094425

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F37E3.1 6422106 6422130 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018156 ncbp-1 F37E3.1 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:F37E3.1 6422106 6422130 1
CDS:F37E3.1 6422187 6422281 1
CDS:F37E3.1 6422327 6422842 1
CDS:F37E3.1 6422892 6423161 1
CDS:F37E3.1 6423273 6423495 1
CDS:F37E3.1 6423589 6423706 1
CDS:F37E3.1 6423750 6423828 1
CDS:F37E3.1 6423879 6424032 1
CDS:F37E3.1 6424076 6424280 1
CDS:F37E3.1 6424597 6424797 1
CDS:F37E3.1 6424845 6424986 1
CDS:F37E3.1 6425032 6425154 1
CDS:F37E3.1 6425203 6425334 1
CDS:F37E3.1 6425440 6425553 1

1 Sequence

Length
2397

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F37E3.1.1 F37E3.1.1 2683   I: 6422061-6425794