WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23H2.1.1 Sequence Name  T23H2.1.1
Length (nt)  5929   Chromosome Location  I: 6447304-6453954
Chromosome . Primary Identifier  I Chromosome Location . Start  6447304
Chromosome Location . End  6453954 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23H2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003798 npp-12 T23H2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23H2.1 T23H2.1 5544   I: 6447332-6447486

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23H2.1.1 6447304 6453954 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16200   183   I: 6447304-6447486 Caenorhabditis elegans
Exon16201   149   I: 6447535-6447683 Caenorhabditis elegans
Exon16202   365   I: 6447726-6448090 Caenorhabditis elegans
Exon16203   262   I: 6448139-6448400 Caenorhabditis elegans
Exon16204   179   I: 6448447-6448625 Caenorhabditis elegans
Exon16205   1284   I: 6448692-6449975 Caenorhabditis elegans
Exon16206   925   I: 6450026-6450950 Caenorhabditis elegans
Exon16207   370   I: 6451000-6451369 Caenorhabditis elegans
Exon16208   157   I: 6451445-6451601 Caenorhabditis elegans
Exon16209   179   I: 6451648-6451826 Caenorhabditis elegans
Exon16210   518   I: 6451894-6452411 Caenorhabditis elegans
Exon16211   329   I: 6452461-6452789 Caenorhabditis elegans
Exon16212   316   I: 6452833-6453148 Caenorhabditis elegans
Exon16213   225   I: 6453194-6453418 Caenorhabditis elegans
Exon16214   488   I: 6453467-6453954 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23H2.1.1 6447304 6453954 1

1 Sequence

Length
5929

1 Sequence Ontology Term

Identifier Name Description
transcript