WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06A5.2.1 Sequence Name  K06A5.2.1
Length (nt)  1104   Chromosome Location  I: 6468113-6469392
Chromosome . Primary Identifier  I Chromosome Location . Start  6468113
Chromosome Location . End  6469392 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06A5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019430 K06A5.2 K06A5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06A5.2 K06A5.2 999   I: 6468182-6468304

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K06A5.2.1 6468113 6469392 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16250   192   I: 6468113-6468304 Caenorhabditis elegans
Exon16251   195   I: 6468350-6468544 Caenorhabditis elegans
Exon16252   198   I: 6468592-6468789 Caenorhabditis elegans
Exon16253   163   I: 6468832-6468994 Caenorhabditis elegans
Exon16254   356   I: 6469037-6469392 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K06A5.2.1 6468113 6469392 1

1 Sequence

Length
1104

1 Sequence Ontology Term

Identifier Name Description
transcript