WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06A5.1a.1 Sequence Name  K06A5.1a.1
Length (nt)  2183   Chromosome Location  I: 6473214-6476756
Chromosome . Primary Identifier  I Chromosome Location . Start  6473214
Chromosome Location . End  6476756 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06A5.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019429 uad-2 K06A5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06A5.1a K06A5.1a 1890   I: 6474209-6474520

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K06A5.1a.1 6473214 6476756 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16263   64   I: 6473214-6473277 Caenorhabditis elegans
Exon16266   126   I: 6474017-6474142 Caenorhabditis elegans
Exon16269   330   I: 6474191-6474520 Caenorhabditis elegans
Exon16272   1056   I: 6474943-6475998 Caenorhabditis elegans
Exon16276   243   I: 6476049-6476291 Caenorhabditis elegans
Exon16280   168   I: 6476346-6476513 Caenorhabditis elegans
Exon16286   196   I: 6476561-6476756 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K06A5.1a.1 6473214 6476756 1

1 Sequence

Length
2183

1 Sequence Ontology Term

Identifier Name Description
transcript