WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K06A5.1a Sequence Name  K06A5.1a
Length (nt)  1890   Chromosome Location  I: 6474209-6474520
Chromosome . Primary Identifier  I Chromosome Location . Start  6474209
Chromosome Location . End  6474520
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06A5.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36655 UAD-2, isoform a 71.4 629 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00002329
WBRNAi00050026
WBRNAi00003934

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K06A5.1a 6474209 6474520 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019429 uad-2 K06A5.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:K06A5.1a 6474209 6474520 1
CDS:K06A5.1a 6474943 6475998 1
CDS:K06A5.1a 6476049 6476291 1
CDS:K06A5.1a 6476346 6476513 1
CDS:K06A5.1a 6476561 6476671 1

1 Sequence

Length
1890

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K06A5.1a.1 K06A5.1a.1 2183   I: 6473214-6476756
Transcript:K06A5.1a.2 K06A5.1a.2 2918   I: 6473218-6476756