WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55B7.6a.1 Sequence Name  C55B7.6a.1
Length (nt)  2270   Chromosome Location  I: 6482440-6485926
Chromosome . Primary Identifier  I Chromosome Location . Start  6482440
Chromosome Location . End  6485926 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55B7.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016945 sulp-1 C55B7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55B7.6a C55B7.6a 2190   I: 6482451-6482678

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.6a.1 6482440 6485926 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16339   239   I: 6482440-6482678 Caenorhabditis elegans
Exon16341   337   I: 6482726-6483062 Caenorhabditis elegans
Exon16344   163   I: 6483104-6483266 Caenorhabditis elegans
Exon16346   541   I: 6483401-6483941 Caenorhabditis elegans
Exon16348   96   I: 6483990-6484085 Caenorhabditis elegans
Exon16350   167   I: 6484399-6484565 Caenorhabditis elegans
Exon16352   120   I: 6484655-6484774 Caenorhabditis elegans
Exon16354   73   I: 6484820-6484892 Caenorhabditis elegans
Exon16356   192   I: 6485302-6485493 Caenorhabditis elegans
Exon16358   179   I: 6485541-6485719 Caenorhabditis elegans
Exon16360   163   I: 6485764-6485926 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.6a.1 6482440 6485926 1

1 Sequence

Length
2270

1 Sequence Ontology Term

Identifier Name Description
transcript