WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55B7.6b.1 Sequence Name  C55B7.6b.1
Length (nt)  2257   Chromosome Location  I: 6482441-6485926
Chromosome . Primary Identifier  I Chromosome Location . Start  6482441
Chromosome Location . End  6485926 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55B7.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016945 sulp-1 C55B7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55B7.6b C55B7.6b 2178   I: 6482451-6482678

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.6b.1 6482441 6485926 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16340   238   I: 6482441-6482678 Caenorhabditis elegans
Exon16342   337   I: 6482726-6483062 Caenorhabditis elegans
Exon16345   163   I: 6483104-6483266 Caenorhabditis elegans
Exon16347   541   I: 6483401-6483941 Caenorhabditis elegans
Exon16349   96   I: 6483990-6484085 Caenorhabditis elegans
Exon16351   167   I: 6484399-6484565 Caenorhabditis elegans
Exon16353   120   I: 6484655-6484774 Caenorhabditis elegans
Exon16355   73   I: 6484820-6484892 Caenorhabditis elegans
Exon16357   180   I: 6485314-6485493 Caenorhabditis elegans
Exon16359   179   I: 6485541-6485719 Caenorhabditis elegans
Exon16361   163   I: 6485764-6485926 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55B7.6b.1 6482441 6485926 1

1 Sequence

Length
2257

1 Sequence Ontology Term

Identifier Name Description
transcript