WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C55B7.9a Sequence Name  C55B7.9a
Length (nt)  699   Chromosome Location  I: 6492885-6492995
Chromosome . Primary Identifier  I Chromosome Location . Start  6492885
Chromosome Location . End  6492995
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55B7.9a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE09020 MDT-18, isoform a 26.6 232 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00007967
WBRNAi00024913
WBRNAi00024914
WBRNAi00066081
WBRNAi00043234
WBRNAi00022309
WBRNAi00087240
WBRNAi00112431
WBRNAi00030184
WBRNAi00112423
WBRNAi00112414
WBRNAi00085244
WBRNAi00116579

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C55B7.9a 6492885 6492995 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007018 mdt-18 C55B7.9 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C55B7.9a 6492885 6492995 -1
CDS:C55B7.9a 6493045 6493331 -1
CDS:C55B7.9a 6493383 6493447 -1
CDS:C55B7.9a 6493501 6493616 -1
CDS:C55B7.9a 6493670 6493744 -1
CDS:C55B7.9a 6493787 6493831 -1

1 Sequence

Length
699

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C55B7.9a.2 C55B7.9a.2 1365   I: 6492721-6494758
Transcript:C55B7.9a.3 C55B7.9a.3 950   I: 6492722-6494754
Transcript:C55B7.9a.1 C55B7.9a.1 778   I: 6492822-6493847